Yong Jung


E-mail: yuj114@psu.edu

Homepage : http://www.snubi.org/~dragon0113
                    http://personal.psu.edu/yuj114

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Ph.D. Candidate in Bioinformatics and Genomics
The Huck Institutes of the Life Sciences
Pennsylvania State University

Advisor: Prof. Vasant Honavar



Research Interests

Publications - Paper

  • Yong Jung, Kyeung Min Joo, Dong Ho Seong, Yoon-La Choi, Doo-Sik Kong, Yonghyun Kim, Mi Hyun Kim, Juyoun Jin, Yeon-Lim Suh, Ho Jun Seol, Chul Soo Shin, Jung-Il Lee, Jong-Hyun Kim, Sang Yong Song and Do-Hyun Nam. (2012) Identification of prognostic biomarkers for glioblastomas using protein expression profiling. International Journal of Oncology 40(4): 1122-32

  • Yong Jung, Hwa Jeong Seo, Yu Rang Park, Jihun Kim, Sang Jay Bien and Ju Han Kim. (2011) Standard-based Integration of Heterogeneous Large-scale DNA Microarray Data for Improving Reusability. Genomics and Informatics 9(1): 19-27

  • Kang Ho Kim, Hae Yong Yoo, Kyeung Min Joo, Yong Jung, Juyoun Jin, Yonghyun Kim, Su Jin Yoon, Seung Ho Choi, Ho Jun Seol, Woong-Yang Park and Do-Hyun Nam. (2011) Time-course analysis of DNA-damage response-related genes after in vitro radiation in H460 and H1229 lung cancer cell lines. Experimental and Molecular Medicine 43(7): 419-426

  • Kyeung Min Joo, Shi Yean Kim, Xun Jin, Sang Yong Song, Doo-Sik Kong, Jung-II Lee, Ji Won Jeon, Mi Hyun Kim, Bong Gu Kang, Yong Jung, Juyoun Jin, Seung-Chyul Hong, Woong-Yang Park, Dong-Sup Lee, Hyunggee Kim and Do-Hyun Nam.(2008) Clinical and biological implications of CD133-positive and CD133-negative cells in glioblastomas. Laboratory Investigation 88(8): 808-15

  • Jihun Kim, Hee-Joon Chung, Yong Jung, Kack-Kyun Kim and Ju Han Kim. (2008) BioLattice: a framework for the biological interpretation of microarray gene expression data using concept lattice analysis. Journal of Biomedical Informatics 41(2): 232-41

  • Yong Jung, Yu Rang Park and Ju Han Kim. (2006) GEORetrieval: Search Engine of Biomedical Experiment based on Array Using Gene Expression Omnibus Meta Data. The Korean Society of Medical Informatics 12(Suppl 2):s61-s64

  • Jung Hoon Woo, Yu Rang Park, Yong Jung, Jihun Kim and Ju Han Kim. (2006) GraPT: Genomic interpreteR About Predictive Toxicology. Genomics and Informatics 4(3):129-132

  • Chan Hee Park, Su Yeon Lee, Yong Jung, Yu Rang Park, Hye Won Lee and Ju Han Kim. (2005) Development of a Web-based Knowledgebase for the Korean Pharmacogenomics Research Network. Genomics and Informatics 3(3):68-73

Publications - Poster

  • Kyeung Min Joo, Shi Yeon Kim, Ji Won Jeon, Mi Hyun Kim, Bong Gu Kang, Yong Jung, Do-Hyun Nam. CD133-negative glioblastoma cancer stem cells represent the 'mesenchymal' subclass of glioblastoma. American Association for Cancer Research Satellite Meeting, Jun 2008, Philadelphia, Pennsylvania, U.S.A.

  • Yu Rang Park, Yong Jung, Ju Han Kim. Metadata registry and management system based on ISO 11179 for cancer clinical trials information system. American Medical Informatics Association 2006, Nov 2006, Washington D.C., U.S.A.

  • Yong Jung, Yu Rang Park, Mi-Ryung Han, Ju Han Kim. Gene Expression Omnibus Integrated into MIAME Format-Based Repository System. Bioinfo 2006, Aug 2006, Pohang, SOUTH KOREA

  • Jung Hoon Woo, Yong Jung, Yu Rang Park, Ju Han Kim. Toxicant Enrichment Analysis for Microarray data. Bioinfo 2006, Aug 2006, Pohang, SOUTH KOREA

  • Chan Hee Park, Mingoo Kim, Hee-Joon Chung, Do Kyoon Kim, Yong Jung, Ju Han Kim. GRIP: a genome research informatics pipeline with open and closed integration of biological databases. Bioinfo 2006, Aug 2006, Pohang, SOUTH KOREA

Experience

  • Sep, 2011
    • Research Scientist in Systems Biomedical Informatics National Core Research Center, Seoul, SOUTH KOREA

  • Sep, 2009
    • Research Scientist in Research & Development team, Cancer Research Institute, Seoul National University College of Medicine, Seoul, SOUTH KOREA

  • Oct, 2007
    • Research Scientist in Department of Neurosurgery, Samsung Biomedical Research Institute (SBRI) & Samsung Medical Center (SMC), Seoul, SOUTH KOREA

  • Aug, 2007
    • Researcher at Seoul National University Biomedical Informatics (SNUBI) Lab. in Seoul National University, College of Medicine, Seoul, SOUTH KOREA

  • May, 2005
    • Internship at Seoul National University Biomedical Informatics (SNUBI) Lab. in Seoul National University, College of Medicine, Seoul, SOUTH KOREA

  • January, 2004
    • Internship in Motorola headquarters, in Schaumburg in IL, U.S.A.

  • August, 2003
    • Exchange student in Illinois Institute of Technology in Chicago, IL, U.S.A.

  • April, 2002
    • Internship in Infra Vally in Bundang, Korea

Lecture Experience

  • R for Bioinformatics and Biomedicine at Seoul National University College of Medicine & Systems Biomedicine Informatics National Core Research Center, SOUTH KOREA
  • Genome Data Analysis Workshop at Seoul National University College of Medicine & Systems Biomedicine Informatics National Core Research Center, SOUTH KOREA
  • An Overview of Computer Science in Nursing Informatics at Gachon University of Medicine and Science, SOUTH KOREA
  • Status of text-mining techniques applied to biomedical text at Seoul National University College of Medicine, SOUTH KOREA

Honors, Awards & Scholarships

  • University Graduate Fellowship (2013) at Pennsylvania State University, USA
  • Best Trainee Award (2008) for outstanding achievement in military training at Korea Army Training Center, SOUTH KOREA
  • Brain Korea 21 Research Fellowship (2006) at Seoul National University & Korean Research Foundation (KRF), SOUTH KOREA
  • Government Scholarship and Stipend (2003) for exchange student in U.S.A. at Ministry of Information and Communication, SOUTH KOREA
  • Summa cum laude graduates (2000) at Seoul Foreign Language High School (The special-purpose high school specializing in gifted students), SOUTH KOREA
  • Entrance scholarship (the most outstanding student) (1997) at Seoul Foreign Language High School, SOUTH KOREA
  • Student Council President (1996) at Bang-Hak Middle School, Seoul, SOUTH KOREA

Computing Proficiency

  • Progamming Language - Python, ANSI C, JAVA, C#, PHP, GW-BASIC, Perl, Fortran
  • DBMS - MySQL, DBase III+, Oracle
  • Operating Systems - Mac OS, Windows, Linux, MS-DOS
  • Statistical Packages - R, SAS, SPSS, Statistica

Hobby and Specialty

  • Weight Training
  • Basketball
  • Swimming
  • Vocal

Last modified : 9th September, 2014