Schedule:
8:45 - 9:00 Breakfast
9:00 - 10:30 Statistical inference I
10:30 - 10:50 Coffee break
10:50 - 12:05 Statistical inference II
12:05 - 1:15 Lunch
1:15 - 3:00 Reproducible reporting I - R Markdown and Batch effects
3:00 - 3:20 Coffee break
3:20 - 5:00 Reproducible reporting II - workflowr
Software installation:
Materials:
Proper statistical inference: correct use of p-values and correlation (slides)
Tools for generating reproducible reporting: R markdown and workflowr (slides)
Resources:
workflowr webpage, (a simple example) and (a more complicated example).
eBook: Biomedical Data Science by Rafael Irizarry and Michael Love
Some reference papers: