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Table 8. Ubiquitin sequences examined

 
Table 8. Synonymous differences per site (ps x 100) within and between poly-u loci A, B, C, D and E of Arabidopsis  
                                                 
    A1 A2 A3 A4 B1 B2 B3 B4 B5 C1 C2 C3 C4 C5 C6 D1 D2 D3 D4 E1 E2 E3 E4
A1                                                
A2   52.6                                            
A3   58.3 49.3                                          
A4   52.4 44.8 50.5                                        
B1   12.4 45.0 60.0 51.0                                      
B2   49.7 14.0 52.5 47.3 45.2                                    
B3   68.7 50.5 30.3 56.4 67.3 53.8                                  
B4   45.7 49.0 39.4 38.1 39.7 49.2 43.8                                
B5   49.4 46.4 52.1 23.1 47.9 49.0 58.0 38.1                              
C1   9.3 54.2 62.9 55.5 18.6 51.3 68.7 50.3 47.8                            
C2   49.3 12.4 55.1 49.2 41.7 14.0 54.9 53.3 52.4 50.8                          
C3   61.0 47.5 30.3 54.9 58.1 52.3 21.1 45.3 51.9 64.1 50.3                        
C4   59.7 47.6 25.9 48.9 55.2 52.4 18.2 31.8 44.4 58.1 50.4 22.7                      
C5   44.2 53.6 40.9 38.1 39.7 50.7 46.8 18.1 42.7 51.8 56.3 45.3 34.8                    
C6   47.6 44.7 48.8 27.6 43.1 50.2 56.2 33.4 10.7 46.0 53.6 51.6 42.6 44.0                  
D1   47.7 69.5 62.8 60.0 54.0 68.3 65.5 63.9 58.5 55.4 69.2 67.0 68.7 60.9 65.9                
D2   66.4 60.4 46.0 52.4 66.5 57.5 51.9 58.0 54.0 67.9 61.6 62.6 50.5 53.4 56.8 55.5              
D3   66.9 56.2 61.9 68.4 64.0 54.9 63.1 60.0 63.8 62.3 59.1 64.7 64.8 61.5 65.0 66.8 45.2            
D4   61.8 60.4 56.8 47.8 61.9 63.8 65.7 51.9 46.3 67.9 66.3 73.3 59.7 54.9 49.2 66.3 63.3 67.0          
E1   49.1 58.6 65.7 53.7 49.3 60.3 68.4 66.8 55.3 52.2 61.3 66.9 65.5 63.8 62.6 24.5 61.5 68.2 63.0        
E2   58.7 59.0 53.8 51.0 62.0 59.2 61.2 56.5 46.4 58.7 61.7 65.8 56.7 61.1 43.1 67.9 30.9 54.6 57.3 63.1      
E3   65.8 66.0 59.3 61.1 67.5 57.0 57.5 54.5 61.2 61.2 62.6 69.6 60.7 53.0 63.9 65.7 44.4 29.3 61.3 62.5 56.7    
E4   65.3 60.8 57.2 59.0 68.6 65.8 72.3 67.6 62.2 71.5 66.7 66.1 69.4 64.5 66.5 57.4 54.4 54.9 45.1 60.3 57.6 63.2  
E5   71.6 60.9 61.9 46.6 70.2 61.1 64.6 53.8 43.6 73.1 66.8 72.3 60.2 56.9 49.5 71.4 60.7 62.8 17.1 66.6 53.0 55.6 53.3
                                                 
 

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| Laboratory of Masatoshi Nei |
| Department of Biology | Eberly College of Science |
| Institute of Molecular Evolutionary Genetics | Penn State |
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This page was last updated 6/5/12 by T. Mazurczyk.