Publications


(Publish under the name Lin Lin)

  • Seshadri C, Lin L, Scriba TJ, Peterson G, Freidrich D, Frahm N, DeRosa SC, Moody DB, Prandi J, Gilleron M, Mahomed H, Jiang W, Finak G, Hanekom WA, Gottardo R, McElrath MJ, Hawn TR. T Cell Responses against Mycobacterial Lipids and Proteins Are Poorly Correlated in South African Adolescents, The Journal of Immunology, 2015 Nov 15; 195(10):4595-603. doi: 10.4049/jimmunol.1501285.

  • Lin L, Finak G, Ushey K, Seshadri C, Hawn TR, Frahm N, Scriba TJ, Mahomed H, Hanekom W, Bart PA, Pantaleo G, Tomaras GD, Rerks-Ngarm S, Kaewkungwal J, Nitayaphan S, Pitisuttithum P, Michael NL, Kim JH, Robb ML, O’Connell RJ, Karasavvas N, Gilbert P, DeRosa S, McElrath MJ, Gottardo R. COMPASS identifies T-cell subsets correlated with clinical outcomes, Nature Biotechnology 33, 610–616, 2015. doi:10.1038/nbt.3187.

  • Lin L, Frelinger J, Jiang M, Finak G, Bart PA, Pantaleo G, McElrath MJ, DeRose SC, Gottardo R. Identification and visualization of multidimensional antigen-specific T-cell populations in polychromatic cytometry data, Cytometry A, 2015. doi:10.1002/cyto.a.22623.

  • Lin L, Chan C, West M. Discriminative variable subsets in Bayesian classification with mixture models, with application in flow cytometry studies, Biostatistics, 2015. doi: 10.1093/biostatistics/kxv021.

  • Lin L, Chan C, Hadrup SR, Froesig TM, Wang Q, West M. Hierarchical Bayesian mixture modelling for antigen-specific T-cell subtyping in combinatorially encoded flow cytometry studies, Statistical Applications in Genetics and Molecular Biology 12, 309-331, 2013

  • Cron AJ, Gouttefangeas C, Frelinger J, Lin L, Singh SK, Britten CM, Welters MJP, van der Burg SH, West M, Chan C. Hierarchical modeling for rare event detection and cell subset alignment across flow cytometry samples, PLoS Computational Biology 9, e1003130, 2013.

  • Gan FF, Lin L, Loke CK. Risk-adjusted Cumulative Sum Charting Procedures, Frontiers in Statistical Quality Control 10, edited by H J Lenza, P Th Wilrich and W Schmid, Berlin-Heidelberg, Germany: Springer Verlag, 2012.

  • Chan C, Lin L, Frelinger J, Hebert V, Gagnon D, Landry C, Sekaly RP, Enzor J, Staats J, Weinhold KJ, Jaimes M, West M. Optimization of a highly standardized carboxyfluorescein succinimidyl ester flow cytometry panel and gating strategy design with discriminative information measure evaluation, Cytometry A 77, 1126-1136, 2010.