Software
PipeMeta Package
>Installation: No installation required, just unzip to a folder on the hard drive. However, see PipeMetaDocs.pdf for important notes regarding additional PipeMeta requirements.
Notes:
>Run PipeMeta from Windows command line prompt
(e.g. C:>Pipemeta/PipeMeta.exe)
PipeMeta: Beta 0.43. A meta script designed to help run a de novo transcriptome annotation pipeline. Package contains 64-bit executables and source scripts.
Added: Support for SNPHunter v2.10 (and related scripts), NCBI BlastPlus, and UniRef100 annotation.
Download: PipeMetaPackage.zip
PipeMeta: Beta 0.44. A meta script designed to help run a de novo transcriptome annotation pipeline. Package contains 64-bit executables and source scripts.
Added: Support for SNPHunter v2.21 (and related scripts). Pfam annotation field added
Download: PipeMetaPackage.zip
>Feel free to contact me for bugs or suggestions at: jcv128@psu.edu