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92. Marden J.H., Langford E.A, Robertson M.A, Fescemyer H.W. 2020. Alleles in metabolic and oxygen-sensing genes are associated with antagonistic pleiotropic effects on life history traits and population fitness in an ecological model insect.  Evolution, in press.

91. Portman, S.L., Felton, G.W., Kariyat, R.R., Marden, J.H. 2020. Host plant defense produces species specific alterations to flight muscle protein structure and flight-related fitness traits of two armyworms. Journal of Experimental Biology jeb.224907 doi: 10.1242/jeb.224907.

90. Stump, S, Marden, J.H., Beckman, N., Mangan, S., Comita, L. 2020. Resistance genes affect how pathogens maintain plant abundance and diversity.  In press, American Naturalist.

89. Lawanprasert, A., Guinan C. A., Langford E.S., Hawkins C.E., Sloand J.N., Fescemyer H.W., Aronson M.R., Halle J.A., Marden J.H.,  Medina, S.H. 2020. Discovery of antitumor lectins from rainforest tree root transcriptomes. PLOS ONE 15 (2): e0229467.

88.  Porras, M., Navas Iannini, C.A., Sandoval Mojica, A.F., Raygoza Garay, J.A., Holguin, G.A., Pincebourde, S., Marden, J.H, De Moraes, C., Rajotte, E.G., Carlo, T. Enhanced heat tolerance of virus-infected aphids leads to niche expansion and reduced interspecific competition.  Nature Communications 11, 1184 (2020).

87. Fister A., Leandro-Muñoz M.E., Zhang D., Marden J.H., Tiffin P., dePamphilis C.W., Maximova S.N., Guiltinan M.J.  Wide ranging differences in tolerance to Phytophthora palmivora in four genetic groups of cacao.  Tree Genetics & Genomes  Tree Genetics & Genomes (2020) 16: 1.

86. Hämälä, T., Wafula, E.K., Zhang, D., Marden, J.H., Maximova, S., dePamphilis, C., Mark J. Guiltinan, M.j., and Tiffin, P.  2019. Gene expression modularity reveals footprints of polygenic adaptation in Theobroma cacao. Molecular Biology & Evolution, 37 (1), 110-123.

85. Subramanian S., Maurer A.C, Bator C.M., Makhov A.M, Conway J.F., Turner K.B., Marden J.H., Vandenberghe L.H., Hafenstein S.L. 2019.  Filling Adeno-Associated Virus Capsids: Estimating Success by Cryo-Electron Microscopy. Human Gene Therapy (cover)

84) DM Pokou, AS Fister, N Winters, M Tahi, C Klotioloma, A Sebastian, JH Marden, SN Maximova, M J Guiltinan. 2019. Resistant and susceptible cacao genotypes exhibit defense gene polymorphism and unique early responses to Phytophthora megakarya inoculation.  Plant Mol Biol 99, 499-516. (article)

83) JH Marden, JFC Perez. 2019. Anti-predator behavior by a nesting hummingbird in response to a caterpillar with eyespots. Ecology 100(4), 2019:e02582.  (article)

82) JE Pekny, PB Smith, JH Marden. 2018. Enzyme polymorphism, oxygen and injury: a lipidomic analysis of flight-induced oxidative damage in a succinate dehydrogenase d (Sdhd)-polymorphic insect.  Journal of Experimental Biology 221, jeb171009. (article)

81) A Gouin, A Bretaudeau, K Nam, S Gimenez, JM Aury, B Duvic, et al.  2017. Two genomes of highly polyphagous lepidopteran pests (Spodoptera frugiperda, Noctuidae) with different host-plant ranges. Scientific Reports 7, 11816. (article)

80) Marden, J.H., Mangan, S.A., Peterson, M., Wafula, E., Fescemyer, H.W., Der, J., dePamphilis, C.W. and Comita, L.S. (2017), Ecological genomics of tropical trees: how local population size and allelic diversity of resistance genes relate to immune responses, co-susceptibility to pathogens, and negative density dependence.  Molecular Ecology 26, 2498-2513. doi:10.1111/mec.13999

79) Liu J, Lemonds T, Marden JH, Popadić, A. 2016. A pathway analysis of melanin patterning in a hemimetabolous insect. Genetics, 203(1): 403-13. (article) (cover)

78)  *Medved V, *Marden JH, Fescemyer HW, Der J, Mahfooz N, Popadić A. 2015. Origin and diversification of wings: insights from a neopteran insect.   PNAS 112(52), 15946–15951. (full text)  *shared first authorship

77) Teller, BJ, Marden, JH, Shea, K. 2015. Covariation in abscission force and terminal velocity of wind‐borne sibling seeds alters long distance dispersal projections. Methods in Ecology and Evolution 6: 593–599, doi: 10.1111/2041-210X.12336.

76) Portman S., Kariyat R., Johnston M., Stephenson A., Marden, J.H.  2015. Cascading effects of host plant inbreeding on the larval growth, muscle molecular composition, and flight capacity of an adult herbivorous insect.  Functional Ecology 29: 328–337 DOI: 10.1111/1365-2435.12358.

75) Padilla, D., Swalla, B., Daniel, T., Dickinson, P., Grunbaum, D., Hayashi, C., Manahan, D.,   Marden, J.H., Tsukimura, B. 2014. Addressing Grand Challenges In Organismal Biology - The Need For Synthesis.  Biosciences 64: 1178–1187,  10.1093/biosci/biu164.

74) Peterson, M., Malloy, J., Buonaccorsi, V., Marden, J.H. 2014. Teaching RNAseq at undergraduate institutions: A tutorial and R package from the Genome  Consortium for Active Teaching.  CourseSource, Vol 2. (article)

73) Warren I.A., Vera J.C., Johns A., Zinna R., Marden J.H., Emlen D.J., Dworkin I. and Lavine, L.C. 2014. Insights into the development and evolution of exaggerated traits using de novo transcriptomes of two species of horned scarab beetles. PLoS One. 2014 Feb 20;9(2):e88364. doi: 10.1371/journal.pone.0088364.

72) Marden, J.H. 2013. Nature's inordinate fondness for metabolic enzymes: why metabolic enzyme loci are so frequently targets of selection. Molecular Ecology 22: 5743–5764. doi: 10.1111/mec.12534 (article)

71) Marden, J.H. 2013.  Reply to “Comment on Marden (2013) regarding the interpretation of the earliest trace fossil of a winged insect.” Evolution DOI: 10.1111/evo.12093.

70) Marden, J.H., Fescemyer, H.W., Schilder, R.J., Doerfler, W.R., Wheat, C.W. 2013. Genetic variation in HIF signaling underlies quantitative variation in physiological and life history traits within lowland butterfly populations. Evolution 67, 1105–1115. (cover),  (full text).

69) Fescemyer HW, Sandoya GV, Gill TA, Ozkan S, Marden JH, Luthe DS. 2013. Maize toxin degrades peritrophic matrix proteins and stimulates compensatory transcriptome responses in fall armyworm midgut. Insect Biochem Mol Biol. 43(3):280-91. doi: 10.1016/j.ibmb.2012.12.008. (full text)

68) Marden, J.H. 2013. Reanalysis and experimental evidence indicates that the earliest trace fossil of a winged insect was a surface-skimming neopteran. Evolution. 67(1): 274-80. DOI: 10.1111/j.1558-5646.2012.01743.x (full text)

67) Dermitzakis K., Carbajal J.P., Marden, JH. 2011. Scaling Laws in Robotics. Procedia Computer Science 7 250–252.

66) Blanford, S., Shi, W., Christian, R., Marden, J.H., Koekemoer, L.L., Brooke, B.D., Coetzee, M., Read, A.F., Thomas, M,B. 2011. Lethal and pre-lethal effects of a fungal biopesticide contribute to substantial and rapid control of malaria vectors. PLoS One. 2011; 6(8):e23591. Epub 2011 Aug 29. (full text)

65) Schilder, RJ., Kimball, SR., Marden, JH., Jefferson, LS. 2011. Body weight-dependent troponin T alternative splicing is evolutionarily conserved from insects to mammals and partially impaired in skeletal muscle of obese rats. J. Exper. Biol. 214:1523-1532. (full text; NY Times coverage)

64) Wheat, CW., Fescemyer, HW., Kvist, J., Tas, E., Vera, J.C., Frilander, M.J., Hanski, I., Marden J.H. 2011. Functional genomics of life history variation in a butterfly metapopulation. Molecular Ecology 20, 1813–1828. (“From the Cover” status). (full text) (perspective piece that accompanied our paper; Faculty of 1000 evaluation; audio podcast of interviews with authors; video of same)

63) Feder ME, Garland T Jr, Marden JH, Zera AJ.  2010. Locomotion in response to shifting climate zones: not so fast. Annu Rev Physiol. 72:167-90. (full text)

62) Wheat, C.W., Haag, C. Marden, J.H., Hanski, I, Frilander, M.  2010. Evidence for balancing selection at a candidate gene (Pgi) influencing ecological dynamics in a butterfly metapopulation. Mol Biol Evol. 27, 267-81. (journal link; Faculty of 1000 evaluation)

61) Niitepõld, K., Smith, A,D., Osborne, J.L., Reynolds, D.R., Carreck, N.L., Martin, A.P., Marden, J.H., Ovaskainen, O., Hanski, I.  2008.  Flight metabolic rate and Pgi genotype influence butterfly dispersal rate in the field. Ecology, 90, 2223-2232. (full text)

60) Bejan, A. and Marden, J.H. 2008. The constructal unification of biological and geophysical design.  Physics of Life Reviews, doi:10.1016/j.plrev.2008.12.002 (journal link).

59)  Marden, J.H., Fescemyer, H.W., Saastamoinen, M., MacFarland, S.P., Vera, J.C., Frilander, M.J., Hanski, I.  2008. Weight and nutrition affect pre-mRNA splicing of a muscle gene associated with performance, energetics and life history. Journal of Experimental Biology 211, 3653-60 (full text).

58)  J. C. Vera, C.W. Wheat, H.W. Fescemyer, M.J. Frilander, D.L. Crawford, I. Hanski, J.H. Marden.  2008. Rapid transcriptome characterization for a non-model organism using 454 pyrosequencing.  Molecular Ecology 17, 1636-47. (pdf; supplementary material)

57) Marden, J.H.  2008. Evolution and physiology of flight in aquatic insects.  In: Aquatic Insects: Challenges to Populations, ed. J. Lancaster.  CABI Press. (pdf)

56)  Marden, J.H.  2008. Dragonfly flight performance: a model system for biomechanics, physiological genetics, and animal competitive behavior.  In: Dragonflies: Model Organisms for Ecological and Evolutionary Research, ed. A. Córdoba-Aguilar.  Oxford University Press.  (email for reprint)

55)  Schilder, R.J. and Marden, J.H.  2007. Parasites, proteomics and performance: effects of gregarine gut parasites on dragonfly flight muscle composition and function.  Journal of Experimental Biology 210: 4298-4306.  (full text)

54)  Schilder, R.J. and Marden, J.H.  2007.  Metabolic syndrome in insects triggered by gut microbes.  Journal of Diabetes Science and Technology 1(5): 794-796. (Invited commentary; email for reprint)

53) Hagner-Holler, S., Pick, C., Girgenrath,S., Marden, J.H., and Burmester, T. 2007.  Diversity of stonefly hexamerins and implication for the evolution of insect storage proteins. Insect Biochem. Mol. Biol. 37:1064-74 (full text)

52)  Schilder, R.J. and J.H. Marden. 2006  Metabolic syndrome and obesity in an insect. 
Proceedings of the National Academy of Sciences, 103, 18805-18809. (full text)

51)  Marden, J.H.  2008.  Quantitative and evolutionary biology of alternative splicing: how changing the mix of alternative transcripts affects phenotypic plasticity and reaction norms.  Heredity 100, 111–120; published online 27 September 2006 (pdf)

50) Bejan, A. and Marden, J.H.  2006.  Constructal theory of running, swimming, and flying.  Chapter 13.8, pp. 805-815, in Advanced Engineering Thermodynamics, 3rd Edition, John Wiley & Sons.  amazon link

49) Bejan, A. and Marden, J.H.  2006.  Constructing animal locomotion from new thermodynamics theory.  American Scientist 94, 342-349.  (abstract

          (This article was also published in french in Pour la Science (full text).)

48)  Bejan, A. and Marden, J.H.  2006.  Unifying constructal theory for scale effects in running, swimming, and flying. Journal of Experimental Biology 209, 238-248. (full text)

47) Haag, C.R., Saastamoinen, M., Marden, J.H., and Hanski, I. 2005.  A candidate locus for variation in dispersal rate in a butterfly metapopulation.  Proceedings of the Royal Society of London B  272, 2449–2456. (full text)

46)  Marden, J.H.  2005. Scaling of maximum net force output by motors used for locomotion. Journal of Experimental Biology 208, 1653-64. 
(full text)

45) Marden, J.H. and J.R. Cobb. 2004. Territorial and mating success of dragonflies that vary in muscle power output and presence of gregarine gut parasites.  Animal Behaviour 68, 657–665.  (full text)

44) Marden, J.H. 2004  Functional and ecological effects of isoform variation in insect flight muscle.  In: Nature's Versatile Engine: Insect Flight Muscle Inside and Out, ed. J. Vigoreaux.  Landes Bioscience, Georgetown, Texas (request reprint by email).

43) Schilder, R.J. and Marden J.H.2004. A hierarchical analysis of the scaling of force production by dragonfly flight motors.  Journal of Experimental Biology 207, 767-776. 
(full text)

42)  Hagner-Holler, S., A. Schoen, W. Erker, J.H. Marden, R. Rupprecht, H. Decker, and T. Burmester. 2004.  A respiratory hemocyanin from an insect.  Proceedings of the National Academy of Sciences
101, 871-874. full text

41) Roberts, S.P., Marden, J.H., and Feder, M.E. 2003. Dropping like flies: Environmentally-induced impairment and protection of locomotor performance in adult Drosophila melanogaster. Physiological and Biochemical Zoology
76, 615-621.

40) Marden, J.H. 2003. The surface-skimming hypothesis for the evolution of insect flight. Proceedings of the 2nd International Congress of Paleoentomology. Acta Zoologica Cracoviensa 46:73-84

39) Montooth, K.L., Marden, J.H., and A.G. Clark. 2003. Mapping determinants of variation in energy metabolism, respiration and flight in Drosophila
. Genetics 165, 623-635. full text

38) Marden, J.H. and M.A. Thomas. 2003. Rowing locomotion by a stonefly that possesses the ancestral pterygote condition of co-occurring wings and abdominal gills. Biological Journal of the Linnean Society
79, 341-349 ( full text ) .

37) Marden, J.H., Rogina, B, Montooth,K.L., and S. Helfand. 2003. Conditional tradeoffs between aging and organismal performance of Indy
long-lived mutant flies. Proceedings of the National Academy of Sciences 100, 3369-3373 ( full text )

36) Marden, J.H. and L. R . Allen. 2002. Molecules, muscles, and machines: universal performance characteristics of motors. Proceedings of the National Academy of Science
99, 4161-4166.( full text )

35) Marden, J.H., G.H. Fitzhugh, M. Girgenrath, M.R. Wolf, and S. Girgenrath. 2001. Alternative splicing, muscle contraction and intraspecific variation: associations between troponin T transcripts, calcium sensitivity,and the force and power output of dragonfly flight muscles during oscillatory contraction. Journal of Experimental Biology
204, 805-814. full text

34) Harrison, J.F. , S. Camazine, J.H. Marden, S.D. Kirkton, A. Rozo, and X. Yang. 2001. Mite not make it home: parasitic tracheal mites reduce the safety margin for oxygen delivery of flying honey bees. Journal of Experimental Biology
204, 805-814. ( full text ) )

33) Thomas, M.A., K.A. Walsh, M.R. Wolf, B.A. McPheron, and J.H. Marden. 2000. Molecular phylogenetic analysis of evolutionary trends in stonefly wing structure and locomotor behavior. Proceedings of the National Academy of Science 97:13178-13183 ( full text )

32) Swallow, J.G., G.S. Wilkinson , and J.H. Marden. 2000. Aerial performance of stalk-eyed flies that differ in eye span. Journal of Comparative Physiology B 170:481-487. ( full text )

31) Marden, J.H., B.C. O'Donnell, M.A. Thomas, and J.Y. Bye. 2000. Surface-skimming stoneflies and mayflies: the taxonomic and mechanical diversity of two-dimensional aerodynamic locomotion.Physiological Zoology 73, 751-764. ( abstract ) ( full text )

30) Marden, J.H. and B. Rowan. 2000. Growth, differential survival, and shifting sex ratio of free-living Libellula pulchella (Odonata: Libellulidae) dragonflies during adult maturation. Annals of the Entomological Society of America 93, 452-458. (full text)

29) Marden, J.H. 2000. Variability in the size, composition, and function of insect flight muscle. Annual Review of Physiology 62, 157-178. (pdf)

28) Marden, J.H., G.H. Fitzhugh, M.R. Wolf, K.D. Arnold, and B. Rowan. 1999. Alternative splicing, muscle calcium sensitivity, and the modulation of dragonfly flight performance. Proceedings of the National Academy of Science 96, 15304-15309 (full text )

27) Marden, J.H., G.H. Fitzhugh, and M.R. Wolf. 1998. From molecules to mating success: Integrative biology of muscle maturation in a dragonfly. American Zoologist 38, 528-544. (full text)

26) Marden, J.H., M.R. Wolf, and K.E. Weber. 1997. Aerial performance of Drosophila melanogaster from populations selected for upwind flight ability. Journal of Experimental Biology , 200, 2747-2755.( full text )

25) Fitzhugh, G.H. and J.H. Marden. 1997. Maturational changes in troponinT expression, calcium sensitivity, and twitch contraction kinetics in dragonfly flight muscle. Journal of Experimental Biology , 200, 1473-1482. ( full text )

24) Kramer, M.G. and J.H. Marden. 1996. Almost airborne. Nature 385, 403-404. (full text)

23) M. P. Mesterton-Gibbons , J.H. Marden, and L. Dugatkin . On wars of attrition without assessment. Journal of Theoretical Biology , 181, 65-83. (full text)

22) Marden, J.H., M.G. Kramer, and J. Frisch. 1996. Age-related variation in body temperature, thermoregulation, and activity in a thermally polymorphic dragonfly. Journal of Experimental Biology 199, 529-535. ( full text )

21) Marden, J.H. and M.G. Kramer. 1995. Plecopteran surface-skimming and insect flight evolution - reply. Science 270, 1685.

20) Marden, J.H. How insects learned to fly. The Sciences 35, 26-30.

19) Marden, J.H. and M.G. Kramer. 1995. Locomotor performance of insects with rudimentary wings. Nature 377, 332-334. (pdf) (cover)

18) Marden, J.H. 1995. Large-scale changes in thermal sensitivity of flight performance during adult maturation in a dragonfly. Journal of Experimental Biology 198, 2095-2102. (abstract & cover) ( full text )

17) Marden, J.H. 1995. Evolutionary adaptation of contractile performance in muscle of ectothermic winter-flying moths. Journal of Experimental Biology 198, 2087-2094. ( full text )

16) Marden, J.H. 1995. Flying lessons from a flightless insect. Natural History 104 (2), 4-8.

15) Marden, J.H. and M.G. Kramer. 1994. Surface-skimming stoneflies: a possible intermediate stage in insect flight evolution. Science 266, 427-430. (pdf)

14) Marden, J.H. and R.A. Rollins. 1994. Assessment of energy reserves by damselflies engaged in aerial wars of attrition for mating territories. Animal Behaviour , 48, 1023-1030. (pdf)

13) Marden, J.H. 1994. From damselflies to pterosaurs: how burst and sustainable flight performance scale with body size. American Journal of Physiology 266, R1077-R1084. (pdf)

12) Marden, J.H. 1992. Newton's second law of butterflies. Natural History, 101(1):54-61. (cover)

11) Anholt, B.R., Marden, J.H. and D.M. Jenkins. 1991. Patterns of mass gain in adult odonates. Canadian Journal of Zoology 69, 1156-1163.

10) Marden, J.H. and P. Chai. 1991. Aerial predation and butterfly design: how palatability, mimicry, and the need for evasive flight constrain mass allocation. Amer. Nat. 138:15-36. (pdf)

9) Marden, J.H. and J.K. Waage . 1990. Escalated damselfly territorial contests are energetic wars of attrition. Animal Behav. 39:954-959. (pdf)

8) Marden, J.H. 1990. Maximum load-lifting and power output by Harris' Hawks are general functions of flight muscle mass. J. Exper. Biol. 149:511-514

7) Marden, J.H. 1989. Bodybuilding dragonflies: Costs and benefits of maximizing flight muscle. Physiol. Zool. 62:505-521. (pdf)

6) Marden, J.H. 1989. Effects of load-lifting constraints on the mating system of a dance fly. Ecology 70:496-502.

5) Marden, J.H. 1987. Maximum lift production during takeoff in flying animals. J. Exper. Biol. 130:235-258. (pdf)

4) Marden, J.H. 1987. In pursuit of females: Following and contest behavior by males of a Namib desert tenebrionid beetle, Physodesmia globosa. Ethology 75, 15-24.

3. Marden, J.H. 1984. Remote perception of floral nectar by bumblebees. Oecologia 64, 232-240. (pdf)

2. Marden, J.H. 1984. Intrapopulation variation in nectar secretion in Impatiens capensis. Oecologia 63, 418-422.

1. Marden, J.H. and K.D. Waddington. 1981. Floral choices by honeybees in relation to the relative distances to flowers. Physiological Entomology 6, 431-435.

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